PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY92482.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 410aa    MW: 46338.6 Da    PI: 5.1576
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY92482.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF30.83.7e-10124163140
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
      SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40 
                 ++ie +  r  t+ +R++g+ KK + L +LCd+ +++ii 
  TEY92482.1 124 EFIEKQKSRLLTLKNRKEGLKKKLHQLTTLCDVPACMIIR 163
                 689***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MRRILDFGGN ASGGIGRIGD ELLNEEDEGK AALSELAYNP ETVLVDPNIT TAIDGLVESI  60
QTGERAPHLS LSLSDSQSER ITNSVELESP IQSRIRDLRL LKSNLSFSII SEIKSMGRRK  120
LKLEFIEKQK SRLLTLKNRK EGLKKKLHQL TTLCDVPACM IIRDPTTNST SIWPEDSAQV  180
RRLIDSYKAD PGAVKTYRVS DFFNERQRSA EGELAKLQKK NLETELSTWD DRLHLMDESQ  240
LREFGAAVRS KALAMRSRID FLKREAIIKK EKESNEMLYL GEFEEIVDQD GIFSIADGMD  300
GISGDDQLPV PEFYCPPPLE TFMDHNYLNQ GYCSSMDVNQ NVDWPVLVIR CVMKRPSFSS  360
ISQSSRLPDL AASHTFQRQL QDPGLDQSLI DALPLFLPQG HHRIEGDIRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.12e-16M-type_MADS family protein