PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY92688.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

SRS

Protein Properties

Length: 244aa MW: 25830.4 Da PI: 8.7417

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY92688.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	212.1	1.3e-65	40	194	4	153
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkelet 102 +++CqdCGnqakkdC+h+RCRtCCksrg+dC+th kstWvpaa+rrerq ++a +s++++ +k++r +++++++s+t++s++++ ++++t TEY92688.1 40 SSSACQDCGNQAKKDCQHRRCRTCCKSRGYDCTTHFKSTWVPAARRRERQLLATAG-----SSQSTSGTKKPRLGAASQTTTASHTSTSNTNQARSFDT 133 5679******************************************97666554.....4446788999999999999999***********9 PP DUF702 103 ss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 ss lP +v+++avf+cvrv++vddge+e+aYq++v+igGhvfkG+LydqG+e TEY92688.1 134 SSshqdaglkesLPGQVRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGFLYDQGVE 194 9999*****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MQLWQHHQQG QNSSAYLIKP MALEHPNLLP SSGGGGASSS SSACQDCGNQ AKKDCQHRRC 60 RTCCKSRGYD CTTHFKSTWV PAARRRERQL LATAGSSQST SGTKKPRLGA ASQTTTASHT 120 STSNTNQARS FDTSSSHQDA GLKESLPGQV RAPAVFKCVR VTAVDDGEDE YAYQAVVKIG 180 GHVFKGFLYD QGVEGREGLP NLSELHLGGG NGASSSPPVN LDHASNIYGG ASFLGGSNYG 240 NPIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	2e-71	SRS family protein