PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY92987.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 164aa    MW: 18013.7 Da    PI: 10.4168
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY92987.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.94.2e-096388227
                -S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHgp 27
                kt+ C  f   G C +Gd+C+FaHg+
  TEY92987.1 63 KTKMCIKFKTEGGCMFGDKCSFAHGE 88
                899*********************96 PP
2zf-CCCH29.71.1e-09139162226
                 -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                 k +lC++f r G C +G+rC+FaH+
  TEY92987.1 139 KKKLCKNFTR-GSCMFGERCHFAHV 162
                 889*******.*************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MDSRKRGRPE SSYGGASKKS KTDSVSLFLP TTPHYTSRIS AFSRISQFIF FVIGYKAVPG  60
AIKTKMCIKF KTEGGCMFGD KCSFAHGERE LIAPSDRGGV DLCLAETTRG ILISNTSSLK  120
VHSTESRKPA RGKIDSNSKK KLCKNFTRGS CMFGERCHFA HVAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19360.19e-08C3H family protein