PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY93122.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 167aa MW: 18944.1 Da PI: 10.622

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY93122.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	91.9	1.3e-28	1	105	22	132
TCP 22 vRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..ssssaseceaesssssasnsssgkaaksaakskksqksaasalnlakesraka 118 +Rls+++a+rfFdLqd LGfdk+skt++WLl+ + ai el++ +s+ +++c++e+ +ss++ k ++ + +q++ +a+esr ka TEY93122.1 1 MRLSLDIARRFFDLQDLLGFDKASKTVDWLLRSSSSAIRELAKGraGSTLSESCTSEEAVSSVG-----KGRRGKSRVVVQQQKR---ATVARESRRKA 91 8****************************************955444446787777777777.....3334443333344444...5899*** PP TCP 119 rararertrekmri 132 r+rarert++k r+ TEY93122.1 92 RERARERTSQKRRL 105 ********9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MRLSLDIARR FFDLQDLLGF DKASKTVDWL LRSSSSAIRE LAKGRAGSTL SESCTSEEAV 60 SSVGKGRRGK SRVVVQQQKR ATVARESRRK ARERARERTS QKRRLMRESD VRVYNSDEAG 120 GTTQGGGFSP WNSFPLNETD HAAFFQQIDE LEFNGRPWED YGFNMSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	104	RRKARERARERTSQKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	1e-15	TCP family protein