PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY93133.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 220aa    MW: 25297.7 Da    PI: 5.6569
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY93133.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.71.1e-3910109199
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 aCaaCk++rrkC++ C+lapyfpa+qpk f+nvh+lFG+snv+k+l++l ++  ++dam+s++ye+++r r Pv G++gv+++l qql+ + +el++++
  TEY93133.1  10 ACAACKYQRRKCSPACPLAPYFPANQPKMFQNVHRLFGVSNVTKILEKLTNKLdKDDAMRSIIYESDMRERFPVAGCCGVLSHLYQQLMAATKELEYVN 108
                 7************************************************77766*****************************************9988 PP

      DUF260  99 e 99 
                 +
  TEY93133.1 109 A 109
                 6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MTVKGGTTPA CAACKYQRRK CSPACPLAPY FPANQPKMFQ NVHRLFGVSN VTKILEKLTN  60
KLDKDDAMRS IIYESDMRER FPVAGCCGVL SHLYQQLMAA TKELEYVNAT LQLCREASRK  120
QVLKHGPMAE LVREQQLQQM VEREQQQHIV EYGGEQFVLN DGADMIEAFG LQKTDVVFDT  180
EEEDVFDSEA QQFSNNIIVF DHERRSYYNP TTKHEEFESR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47870.17e-45LBD family protein