PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY93237.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 434aa MW: 48910.1 Da PI: 6.8023

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY93237.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.4	9.1e-06	3	35	4	36
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36 + C+ ++e++ +++C+++ +lC +C ++H+ TEY93237.1 3 QLCDFCGEQRSIIHCRSDAACLCLSCDRSIHSA 35 57*****************************54 PP
2	zf-B_box	20.8	8.1e-07	47	89	5	40
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htvv 40 C+++++++++ C + ++ lC+dC ++H + H+++ TEY93237.1 47 LCERCHSQPAITRCIQESTSLCQDCNWSGHASappsdveHKRQ 89 7*****************************8788888888876 PP
3	CCT	66.7	6.4e-23	377	420	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+ a+lRYkeKrk+RkF+KkirY+sRK++A+ R+RvKGrFvk+ TEY93237.1 377 RDDAVLRYKEKRKSRKFDKKIRYASRKERADVRKRVKGRFVKAG 420 899**************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MGQLCDFCGE QRSIIHCRSD AACLCLSCDR SIHSANALSK RHLRTLLCER CHSQPAITRC 60 IQESTSLCQD CNWSGHASAP PSDVEHKRQM INLYSGCPSA ADFSRIWSFF SVDKSITNPQ 120 PDPMNLETPS RSHADFCTED TGMEITAPEA GQFDGKGPVD SMNPKVIVIR LAGFLLLVKP 180 WKRTLQLFLL PKSTFYFRSD SPAFMLFWLL PRLVESSFMK ACSPKKDPGP TQETPCQNFY 240 ISDTELSLDD YEALFDESRD ETQQFLDNGG ADSFFGMRDM YDNECNVKGV TTKASSSKVE 300 TLKHNCTTSN QLSAESMTSC KSDSNDCVPR PAQSTHSISF SGQTTECNTR DLPESGGFSS 360 VIMEEHQYDI QFSSAVRDDA VLRYKEKRKS RKFDKKIRYA SRKERADVRK RVKGRFVKAG 420 DPYDYDPLDV IKNQ

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MGQLCDFCGE QRSIIHCRSD AACLCLSCDR SIHSANALSK RHLRTLLCER CHSQPAITRC  60
IQESTSLCQD CNWSGHASAP PSDVEHKRQM INLYSGCPSA ADFSRIWSFF SVDKSITNPQ  120
PDPMNLETPS RSHADFCTED TGMEITAPEA GQFDGKGPVD SMNPKVIVIR LAGFLLLVKP  180
WKRTLQLFLL PKSTFYFRSD SPAFMLFWLL PRLVESSFMK ACSPKKDPGP TQETPCQNFY  240
ISDTELSLDD YEALFDESRD ETQQFLDNGG ADSFFGMRDM YDNECNVKGV TTKASSSKVE  300
TLKHNCTTSN QLSAESMTSC KSDSNDCVPR PAQSTHSISF SGQTTECNTR DLPESGGFSS  360
VIMEEHQYDI QFSSAVRDDA VLRYKEKRKS RKFDKKIRYA SRKERADVRK RVKGRFVKAG  420
DPYDYDPLDV IKNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	4e-74	CO-like family protein