PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY93247.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

NF-YB

Protein Properties

Length: 219aa MW: 24579.8 Da PI: 6.1705

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY93247.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	173.2	2.8e-54	50	144	1	95
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isf+tsea+d+cqre+rkti+++d+lwa+++lGf+dy+epl+vyl++yre++g TEY93247.1 50 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITSEANDRCQREQRKTITAEDVLWAMSKLGFDDYIEPLTVYLHRYREFDG 144 69******************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MELGENNGGG GFHGYRRLPT PNSELKAADM SMGLPSPQTN PGGDESECIV REQDRFMPIA 60 NVIRIMRKIL PPHAKISDDA KETIQECVSE YISFITSEAN DRCQREQRKT ITAEDVLWAM 120 SKLGFDDYIE PLTVYLHRYR EFDGGERGSL RGEPLVKRMV DHNTMGFHAF PPPAFHHIPH 180 HHAFFGAAPM NFFKDSPNAG PSQAAVACID PFPQLKDQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	1e-66	NF-YB family protein