PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG000010.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 624aa    MW: 73169.8 Da    PI: 7.5979
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG000010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR180.23.6e-2525119191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                       +fYn+YA e GFsvrks+ +    n+ i+ r+ vCs++g+re+++ k   ++++rr+r+ tr+gC+akl++++++ +g+w v+++  eH+H+l
  TRIDC1AG000010.1  25 EFYNKYALEKGFSVRKSYVEWDGSNKYIILRKIVCSRQGFREDKHMKrkmEDRKRRPRSLTRVGCNAKLVITRQEeTGRWFVKDFIDEHSHPL 117
                       6******************************************999888889999*******************99****************9 PP

              FAR1  90 ap 91 
                       ap
  TRIDC1AG000010.1 118 AP 119
                       86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 624 aa     Download sequence    
ASDESMFEYV NVVSKMFDSE AEGYEFYNKY ALEKGFSVRK SYVEWDGSNK YIILRKIVCS  60
RQGFREDKHM KRKMEDRKRR PRSLTRVGCN AKLVITRQEE TGRWFVKDFI DEHSHPLAPR  120
DLSCLLCSHR RISDEQKADI ADMEKCGIRK YRIMDILCFQ YGGYDKVGCM KRDIYNFCHA  180
NKQETISAGD AKTVIMHMMA RRERDVDFFF KYLVDEHGHL KGLFWADSQS RLDYEAFGDV  240
IVFDSTYRIS KYNLPFVPFV GLNHHRSTVI FGCGIISHET SQAYEWMLRT FSDCMAQKHP  300
IFVITDGDLA MQRAIRVVWP DSNHRLCIWH IQQNIVCHLH DDDVKEEFRS FIYDTSSIEE  360
HEIKWIQFLQ RNKVTSEESW LHQMYQMRKL WCAPYLEGRC FLGLSSNQRS ESLNSLLHTH  420
LEGKMSLFEM LEHYECCLAS RRINEALHDV EALQSIPFTE ENASPLEKHA ATVFTPSVFK  480
MVLWSIDAVS KCQIREILDG LEDSTYVVSK QERMDKKFGV RIEEQGGLLH RVSCSCRKLE  540
CAGTPCSHIF YILGILKQTI LPGCCIPTRW TMNAKCAYAP TRKNQMYDYS VSLQRYRELR  600
NCSHTASFQA CHSDEDYHRL KMLL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17681DRKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-98FAR1 family protein