PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG003580.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 110aa    MW: 12532.1 Da    PI: 10.8325
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG003580.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox39.21.2e-124592956
                      HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  9 keqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      + q+++  ++F+k+++p++++ + L++++g++  q+++WFq  Ra+ k
  TRIDC1AG003580.1 45 PRQIRRCRRAFKKCPHPDQTQVANLSRETGMEVHQIQYWFQTLRAQIK 92
                      67999999**********************************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
TAEQQDLSSV LFLLQSSPPV LSSGQRELER GWYLQVAMDG HRRAPRQIRR CRRAFKKCPH  60
PDQTQVANLS RETGMEVHQI QYWFQTLRAQ IKGSSSNTRP PTKGSSSPDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.11e-10HD-ZIP family protein