PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG004600.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 153aa MW: 16656.1 Da PI: 9.1962

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG004600.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00029	39	61	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++F++ L H +H TRIDC1AG004600.1 39 FVCKTCDRVFPSFQALGGHRASH 61 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MKRFEFEREM ARVLLHVSRE QPIPKPAAGR GDNTPERAFV CKTCDRVFPS FQALGGHRAS 60 HKKPRLDGDG DLKPKMHGCS VCSLEFAVGQ ALGGHMRRHR AMLAGGRGVA TSPPATTINK 120 PVVGSKRVLW LDLNHPPCDD GGSIEADHSE CGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	3e-27	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG004600.1