PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG004610.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 199aa MW: 21049.9 Da PI: 7.2363

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG004610.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.00096	48	70	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+++F++ L H +H TRIDC1AG004610.2 48 FMCKTCDRVFPSFQALGGHRASH 70 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MRRFAFEERE MARVLLLVSR EQAMPMPMPS SVGASVTGRG DRAPERAFMC KTCDRVFPSF 60 QALGGHRASH KKPRLDGDGD FKPKMHGCSI CGLEFAVGQA LGGHMRRHRA MVAGGHGVTA 120 GPPAKTVNNL DDSSNAVVVV GSGGGIKPGL WLDLNQPPCD DVGGSDVDHG ECGHDAAAAG 180 YTFHQFLDAG TMPVDCVGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59820.1	2e-25	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG004610.2