PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG006280.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 296aa MW: 34344.7 Da PI: 8.4756

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG006280.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.7	9.6e-19	112	197	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+ YAk+ GF v ++++++ +++ +t t+ Cs++gk++ ++k+ + ++++tr++C ak + +++ ++k+++t+l l+HnH+++p TRIDC1AG006280.1 112 RFYKGYAKKKGFGVMRRTTRYG-EDNMVTYFTLACSRQGKTQCSEKN---SFMPNPSTRMQCPAKSNFSRR-EEKFCITSLTLDHNHPISP 197 5*************999998.5666************9999...999*************9.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
PIYTCFRLNI ILPLQHLIAL INPIYTCSTL NICLPLYHIS DLFVGNFRYS IEPGLNLDEV 60 AEQNRPVLDE DDEDAFIVEE IGDSSDERQV KPIRTLESRK GMVFDSEDDA VRFYKGYAKK 120 KGFGVMRRTT RYGEDNMVTY FTLACSRQGK TQCSEKNSFM PNPSTRMQCP AKSNFSRREE 180 KFCITSLTLD HNHPISPSKS RFFRCHKKLD LHSKRRLELN DQAGIRMNKN FGSLVMEAGG 240 YGNLELVKRN VGTICKRKEG CNLVLEMHML FINIFFVCNQ KIQTFSMLWM WLRMDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	8e-07	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG006280.1