PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG007150.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 274aa MW: 29814.7 Da PI: 8.6975

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG007150.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.6	2.9e-20	22	81	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql +Lee+++ r+p+a+++++++++l +++ ++V++WFqN++a++++ TRIDC1AG007150.2 22 TRWCPTPEQLMILEEMYRGgLRTPNASQIQQITAHLahygRIEGKNVFYWFQNHKARDRQ 81 8***************99***********************************996 PP
2	Wus_type_Homeobox	119.4	1.5e-38	21	82	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +tRW+PtpeQ++iLee+y+ GlrtPn+++iq+ita+L++yG+ie+kNVfyWFQN+kaR+rqk TRIDC1AG007150.2 21 TTRWCPTPEQLMILEEMYRGGLRTPNASQIQQITAHLAHYGRIEGKNVFYWFQNHKARDRQK 82 79***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
ARAMAATATA TAAATSVVTG TTRWCPTPEQ LMILEEMYRG GLRTPNASQI QQITAHLAHY 60 GRIEGKNVFY WFQNHKARDR QKLRRRLCMS HHLLSCAHYY AAANAGQYQQ QQQLLGAGAV 120 PPPLLQHPQQ QQYYSASCAG GGYDQHLLPT TVPASAYAAA AGYAYPFAGV PASRCAEPSP 180 PNTPLSFHHQ VRNLRCYLGG GVVGSPEYSL GRLGNFGVVE DTCRPSRYEQ QPQQLAAATE 240 DQAAPVTATG LFCRPLKTLD LFPGAIKEEQ RDVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	3e-39	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG007150.2