PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG007920.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 132aa MW: 15237.2 Da PI: 9.6021

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG007920.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.5	3.4e-13	2	42	10	55
AP2 10 kkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TRIDC1AG007920.7 2 RRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 42 569*******......55**********************997 PP
2	AP2	29.4	2.1e-09	85	124	1	44
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAak 44 s+y+GV+ +k grW+A+ + +k+++lg f+ + eAa+ TRIDC1AG007920.7 85 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEVEAAR 124 89******.7**5553..2.26********889997 PP

Sequence ? help Back to Top
Protein Sequence Length: 132 aa Download sequence
YRRTGRWESH IWDCGKQVYL GGFDTAHAAA RAYDRAAIKF RGVDADINFN LSDYEDDMKQ 60 MKGLSKEEFV HVLRRQSTGF SRGSSKYRGV TLHKCGRWEA RMGQFLGKKY IYLGLFDNEV 120 EAARFLSLDS AH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	2e-73	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG007920.7