PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG009520.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 440aa MW: 47529.6 Da PI: 7.9393

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG009520.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.6	1.1e-32	178	237	1	60
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 ++DgynWrKYGqK+vkgse+prsYY+Ct+++C++kkkvers d+++++i+Y+g H+h+k TRIDC1AG009520.3 178 VEDGYNWRKYGQKQVKGSENPRSYYKCTYNNCSMKKKVERSLADGRITQIVYKGAHDHPK 237 58********************************************************85 PP
2	WRKY	103.5	1.2e-32	323	381	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d+++v++tYeg+H h+ TRIDC1AG009520.3 323 LDDGFRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERASHDNRAVITTYEGKHSHD 381 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MSSSTGSLDH AGFTFTPPPF ITSFTELLSG SGAGDAERSP RGFNRGGRAG APKFKSAQPP 60 SLPISSPFSC FSVPAGLSPA ELLDSPVLLN YSHILASPTT GAIPAQRCDW QASADLNTFQ 120 QDELGLSGFS FHAVKSNATV NAQANYLPLF KEQQEQQQEE VVQVSNKSSS SSGNNKQVED 180 GYNWRKYGQK QVKGSENPRS YYKCTYNNCS MKKKVERSLA DGRITQIVYK GAHDHPKPLS 240 TRRNSSGCAA VVAEDHTNGS EHSGPTPENS SVTFGDDEAD KPETKRRKEH GDNEGSSGGT 300 GGCGKPVREP RLVVQTLSDI DILDDGFRWR KYGQKVVKGN PNPRSYYKCT TVGCPVRKHV 360 ERASHDNRAV ITTYEGKHSH DVPIGRGRAL LASSSSDSSA VIWPAAAVQA PCTLEMLAGH 420 PGYAAKDEPR DDMFVESLLC

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MSSSTGSLDH AGFTFTPPPF ITSFTELLSG SGAGDAERSP RGFNRGGRAG APKFKSAQPP  60
SLPISSPFSC FSVPAGLSPA ELLDSPVLLN YSHILASPTT GAIPAQRCDW QASADLNTFQ  120
QDELGLSGFS FHAVKSNATV NAQANYLPLF KEQQEQQQEE VVQVSNKSSS SSGNNKQVED  180
GYNWRKYGQK QVKGSENPRS YYKCTYNNCS MKKKVERSLA DGRITQIVYK GAHDHPKPLS  240
TRRNSSGCAA VVAEDHTNGS EHSGPTPENS SVTFGDDEAD KPETKRRKEH GDNEGSSGGT  300
GGCGKPVREP RLVVQTLSDI DILDDGFRWR KYGQKVVKGN PNPRSYYKCT TVGCPVRKHV  360
ERASHDNRAV ITTYEGKHSH DVPIGRGRAL LASSSSDSSA VIWPAAAVQA PCTLEMLAGH  420
PGYAAKDEPR DDMFVESLLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07100.1	4e-90	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG009520.3