PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG010600.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 324aa MW: 35465.7 Da PI: 6.5968

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG010600.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.2	1.9e-18	47	94	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed llvd++ ++G g+W++ ar+ g++Rt+k+c++rw++yl TRIDC1AG010600.1 47 RGPWTAGEDMLLVDYISKHGEGRWNSLARCAGLRRTGKSCRLRWLNYL 94 89********************************************97 PP
2	Myb_DNA-binding	53.4	5.8e-17	100	143	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l++d++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC1AG010600.1 100 RGNITPEEQLLILDLHSRWGNR-WSKIAQRLP-GRTDNEVKNYWRT 143 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MDMDKEYYKA CMGMEALPMS PAGFSAVTTE AAMAVATASE DEGDLKRGPW TAGEDMLLVD 60 YISKHGEGRW NSLARCAGLR RTGKSCRLRW LNYLRPDVRR GNITPEEQLL ILDLHSRWGN 120 RWSKIAQRLP GRTDNEVKNY WRTRVQKHAK QLHCDVNSDR FRDVVRQVWM PRLLERIQAE 180 SSSSSAAAAA GVGVPALTRA MSSPAGASQY HCFDHASSGG PSRKVAVTMS PDTSSTLRSS 240 LSPAETSHGA HFPAWGAATA TANVDGSMMQ CAGREGGAIG GDQYVIHGDS LSGSWSELLA 300 ATDIPDFEFG NFDDNLWSLE DIYC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G48000.1	7e-77	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG010600.1