PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG011790.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 473aa MW: 51180.1 Da PI: 8.9236

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG011790.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	52.8	6.9e-17	373	419	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRdriN+++ L+el+P++ K +Ka++Le+A+eY+k Lq TRIDC1AG011790.2 373 VHNMSERRRRDRINEKMRALQELIPNC-----NKIDKASMLEEAIEYLKTLQ 419 5***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
KIIPRQPRRG VGRATPVAAG AGRPPSFIYP RLPLPGMSEP GNELDELLWD NGPALRRAAS 60 PFPPFSCSPA GTMKAQELAK HPASATAMAQ GHDDDAVPWL QHYPIIGVDD GGGGDTAPLP 120 QDYFSTLFPG FSDLPAAVAG RDAGAPSTSH AAVVVPPLPE PPVLPKQQQQ QQQQPPPPRS 180 TGEGVMNFSF FSRPLQRSLP QASVRPSAAG SKSVESTLLQ TNRLRSTPLF SEQRTAWLQP 240 PRESPATVAA PRPLAPPVPV QHAAEPAAAL SQRLQPEARA AALPPRLQPE PRAAALPQRL 300 QSEARASEMP PPPATATTSS VCSDNGERSQ LKRSSHQTLE WSVSQDDEDL DDEAGGLRRS 360 AARSTKRGRT AEVHNMSERR RRDRINEKMR ALQELIPNCN KIDKASMLEE AIEYLKTLQL 420 QVQMMSTMGT AGLCMPPMMA MQHMQMPPMA HFHHHHLGAM GYGMGPFDPR LVA

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

KIIPRQPRRG VGRATPVAAG AGRPPSFIYP RLPLPGMSEP GNELDELLWD NGPALRRAAS  60
PFPPFSCSPA GTMKAQELAK HPASATAMAQ GHDDDAVPWL QHYPIIGVDD GGGGDTAPLP  120
QDYFSTLFPG FSDLPAAVAG RDAGAPSTSH AAVVVPPLPE PPVLPKQQQQ QQQQPPPPRS  180
TGEGVMNFSF FSRPLQRSLP QASVRPSAAG SKSVESTLLQ TNRLRSTPLF SEQRTAWLQP  240
PRESPATVAA PRPLAPPVPV QHAAEPAAAL SQRLQPEARA AALPPRLQPE PRAAALPQRL  300
QSEARASEMP PPPATATTSS VCSDNGERSQ LKRSSHQTLE WSVSQDDEDL DDEAGGLRRS  360
AARSTKRGRT AEVHNMSERR RRDRINEKMR ALQELIPNCN KIDKASMLEE AIEYLKTLQL  420
QVQMMSTMGT AGLCMPPMMA MQHMQMPPMA HFHHHHLGAM GYGMGPFDPR LVA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	378	383	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	3e-30	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG011790.2