PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG011830.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 344aa    MW: 37537.6 Da    PI: 5.1632
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG011830.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.74.6e-072252246
                      T-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqk 46
                      ++W+ Ia+ m+ gRt++++k+ w++
  TRIDC1AG011830.1  2 RRWSQIAAQMP-GRTDNEIKNLWNS 25
                      56*********.*********9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MRRWSQIAAQ MPGRTDNEIK NLWNSSLKKK LRQKGIDPNT HKPLTEADRI GAAPTISTER  60
TSGSSDVNPS SAGALGNFGH LLSETAQSSV LLPVYDKKRP ETPSLARPKV PAKELFLDQL  120
TAGHESPSSC RSSGPTLYFP FQQQLGYSNE CGSGDGANMN SLWFNQNDFS CNTISTVMPT  180
VSPSALSTPM GLNLPPDNHR HGGTGIGSAP FYWDGVNPSS SGSTGSSGSN SMGFEPQSTN  240
SILENSVFPW TDIGVGQEKD TRVQLVEELK WPDLLHGTFA EATTAMQNQS QSLYDDVIKA  300
ESQFNMEGIC ASWFQNQQPQ QQLQAASDMY DKDLQRMPLS FEHI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12733LKKKLRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09540.13e-14MYB family protein