PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG015260.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 200aa    MW: 22221.4 Da    PI: 8.2962
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG015260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.69.3e-163579147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r rWT eE+e++++a + +G + Wk+I + +  ++t  q++s+ qk+
  TRIDC1AG015260.1 35 RERWTDEEHERFLHALHIFGRD-WKSIEALVA-TKTSVQIRSHAQKH 79
                      78******************77.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MATMVRGVRM PAAARSSAAG RNKKLRKTYT ITRPRERWTD EEHERFLHAL HIFGRDWKSI  60
EALVATKTSV QIRSHAQKHF LKAQKLGLGA CLPPPLHPRR GAALGQQPPA HPDADMLEPS  120
MDWACAAPES RWPDLDAPGA EEWPSAGALH LQDETVELPL SPHDLRFALV YRFVGDVFAS  180
DAAVPVDAQL HRLQLQGVDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01280.12e-33MYB_related family protein