PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG015830.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 625aa MW: 68397.5 Da PI: 5.8997

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG015830.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.6	5.3e-14	452	497	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h + Er+RR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L TRIDC1AG015830.3 452 SHVMQERKRREKLNERFIVLRSLVPFV-----TKMDKASILGDTIEYVKQL 497 899*********************8.....8***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 625 aa Download sequence
MASSGEVQRS LQAVAQGLRW TYALLWQLCP DQGALVWAEG HYNGAIKTRK TVQPAVAQAQ 60 VPTPAAEAAD QARSRQLREL FDSLAREAAA GGGTGFRDVH GCAQEARRPS AALAPEDLTE 120 TEWFYLMSAS YSFPPGVGLP GRAFARGGHV WLSRANEVDS KAFSRAILAR TVVCIPIVDG 180 VLEIGTTEKV EEDMGLVQYA MAIFMDQQET HMISSICHSN QTSHIDQQSF QTQRKTSTGQ 240 PKPEPNKFNP EYEDDEMEYD DDEIDAECAS GSASHDDHAT HNAGSSELMQ VETSERVRDG 300 CSSNFGDEIQ MLMVCQNSTD DHSNLHGQNE AWHFLYEELC SGYPQSSGTA GENQAMAENA 360 HYAQTLSLIL HRNNALRQAG GLNTGSYLAV SLQSSFSRWD AGIHGRTVAQ GTTRQKMLKS 420 VLLFFSAACN KPPGDPRCDD AGARREVDFG ASHVMQERKR REKLNERFIV LRSLVPFVTK 480 MDKASILGDT IEYVKQLTKR IQDLESSTVR GPAMSKEKRA LPTGMEGASS SSGSSGSTPV 540 ATDVQVSIIE SDALLELRCP DRHGLLVTIM QTLQEQLRLE VTSVQASSDH GVLLAELRAK 600 VREVHGRRSS ISQVKRAIHL IISSG

Sequence ? help Back to Top

Protein Sequence Length: 625 aa Download sequence

MASSGEVQRS LQAVAQGLRW TYALLWQLCP DQGALVWAEG HYNGAIKTRK TVQPAVAQAQ  60
VPTPAAEAAD QARSRQLREL FDSLAREAAA GGGTGFRDVH GCAQEARRPS AALAPEDLTE  120
TEWFYLMSAS YSFPPGVGLP GRAFARGGHV WLSRANEVDS KAFSRAILAR TVVCIPIVDG  180
VLEIGTTEKV EEDMGLVQYA MAIFMDQQET HMISSICHSN QTSHIDQQSF QTQRKTSTGQ  240
PKPEPNKFNP EYEDDEMEYD DDEIDAECAS GSASHDDHAT HNAGSSELMQ VETSERVRDG  300
CSSNFGDEIQ MLMVCQNSTD DHSNLHGQNE AWHFLYEELC SGYPQSSGTA GENQAMAENA  360
HYAQTLSLIL HRNNALRQAG GLNTGSYLAV SLQSSFSRWD AGIHGRTVAQ GTTRQKMLKS  420
VLLFFSAACN KPPGDPRCDD AGARREVDFG ASHVMQERKR REKLNERFIV LRSLVPFVTK  480
MDKASILGDT IEYVKQLTKR IQDLESSTVR GPAMSKEKRA LPTGMEGASS SSGSSGSTPV  540
ATDVQVSIIE SDALLELRCP DRHGLLVTIM QTLQEQLRLE VTSVQASSDH GVLLAELRAK  600
VREVHGRRSS ISQVKRAIHL IISSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	457	462	ERKRRE
2	458	463	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	2e-59	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG015830.3