PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG016350.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 138aa    MW: 15834 Da    PI: 7.4641
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG016350.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.71.9e-1336115190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                        +fYn Y  e+GF +r  ks+ +  +++  +++ vC ++gk++ e+++         + r++C a +++   +d+ w++t+ +  HnH+++
  TRIDC1AG016350.12  36 DFYNLYLWEIGFGIRYGKSRLN-AERTKSMQEIVCGCSGKPDAENSR---------SCRCKCPALIRLLCASDNSWYITEHRASHNHSMS 115
                        6*****************9999.44558999*********9997666.........99*****************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MSALELSIRK YDEQPDKSVV RPELGLSFDS LGEAYDFYNL YLWEIGFGIR YGKSRLNAER  60
TKSMQEIVCG CSGKPDAENS RSCRCKCPAL IRLLCASDNS WYITEHRASH NHSMSLTMGE  120
KVHWPSHKHI DVYTKDLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.15e-11FAR1 family protein