PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG018130.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 171aa MW: 19410.2 Da PI: 10.6407

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG018130.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	98.5	2.7e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs +g+lyeys+ TRIDC1AG018130.2 9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSGRGRLYEYSN 59 79***********************************************95 PP
2	K-box	91.2	1.8e-30	76	168	3	95
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 +ss ++e +a+++qqe+akLk++i +Lq+++R l+G+ + ++s+++L+qLe +L+k+l kiR++Knell+++ie++q++ +++++ ++L+ TRIDC1AG018130.2 76 TSSAGTVAEINAQHYQQESAKLKQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRVHKQSKSRTNLN 168 4455559999***************************************************************************99999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MGRGRIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSG RGRLYEYSNN 60 SVKATIERYK KATSDTSSAG TVAEINAQHY QQESAKLKQQ ITTLQNSNRT LIGDTMATMS 120 HRDLKQLEGR LDKGLGKIRA RKNELLCAEI EYMQRRVHKQ SKSRTNLNAG S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18960.1	2e-88	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG018130.2