PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG021220.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 147aa    MW: 17353.7 Da    PI: 10.2059
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG021220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.68e-1094141348
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 
                        WT eE ++l+++v+++G g+W+++ r+      R + ++k++w++ +
  TRIDC1AG021220.1  94 HWTLEEVKKLIRGVRRYGEGRWTKVKRHYFssSVRKPTHLKDKWRNIR 141
                       5****************************9996799*********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
EAILADPLDW LPSSVTIPRP SQVEEYFSYV YGDDDMEINK FAQEPEDGQC HQQYLGEFIL  60
NKNGRCAPQG PRKRRIFPSE SRGKKLHSRK NNEHWTLEEV KKLIRGVRRY GEGRWTKVKR  120
HYFSSSVRKP THLKDKWRNI RRACGVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.12e-14MYB_related family protein