PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG021240.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 99aa    MW: 11522.6 Da    PI: 10.6298
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG021240.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.91.9e-071865348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48
                       WT eE ++lvda    G g+W++  +  +     Rt+ ++k++w++++
  TRIDC1AG021240.6 18 HWTYEEMKKLVDALYISGVGNWTKLKH-ENfstSVRTAMNLKDKWRNLK 65
                      6***********************555.5559977************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MSSICKGKKC GHRKNNDHWT YEEMKKLVDA LYISGVGNWT KLKHENFSTS VRTAMNLKDK  60
WRNLKKAYTG NAKKRILPTL DKDCVEKIQK LASKMKLHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17460.18e-13MYB_related family protein