PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG023580.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 219aa MW: 23848.5 Da PI: 9.8495

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG023580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.6	1.7e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd++l+d+++++G ++W++ +++ g+ R++k+c++rw +yl TRIDC1AG023580.1 14 RGAWSPEEDQRLADYIARHGHPNWRALPKHAGLLRCGKSCRLRWVNYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	47.4	4.5e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++l++++++ G++ W+ Ia+ ++ gRt++++k+ w+++l TRIDC1AG023580.1 67 RGNFTADEEDLIIRLHQTVGNR-WSVIAAQLP-GRTDNEIKNVWHSHL 112 89******************.*****.*********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MGRAPCCEKD GLKRGAWSPE EDQRLADYIA RHGHPNWRAL PKHAGLLRCG KSCRLRWVNY 60 LSPDIKRGNF TADEEDLIIR LHQTVGNRWS VIAAQLPGRT DNEIKNVWHS HLKKRLEDGL 120 KPAADHDAGG SGRQKSRKQA KARSATVDAR KRQKSPQGQS SSSLTCSTVT ESAAAVSSSP 180 SDNATITGAS HGHQLVKEDT SSSEAVTDNS FLSSTDVTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	2e-73	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG023580.1