PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG029280.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 576aa MW: 62168.6 Da PI: 6.9098

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG029280.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.4	1.1e-12	399	444	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L TRIDC1AG029280.2 399 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 444 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
ELNSLIAGGG AAAPDEAVEE EVTDTEWFFL VSMTQSFPNG MGLPGQALFA GQPTWIATGL 60 ASAPCERARQ AYTFGLRTMV CIPLGTGVLE LGATEVIFQT NDSLGRIRSL FNLNGGGGGS 120 GSWPPIAPPP QEAETDPSVL WLADAPAGDM KESPPSVEIS VSKPPQPQPP QIHQFENGST 180 STLTENPGLS VHAQQPPPQQ AAASAQRQNQ HQLQHQHQLQ LQHQHNQGPF RRELNFSDFA 240 SNASVTVTPP FFKPESGEIL NFGADSTSRR NPSPAPPAAT ASLTTAPGSL FSQHTATVTA 300 PSNDAKNNPK RSMEATSRAS NTNHHQTATA NEGMLSFSSA PTTRPSTGTG APAKSESDHS 360 DLEASVREVE SSRVVPPPEE KRPRKRGRKP ANGREEPLNH VEAERQRREK LNQRFYALRA 420 VVPNVSKMDK ASLLGDAISY INELRGKMTA LESDKETLHS QIEALKKERD ARPAAPSSGM 480 HDNGARCHAV EIEAKILGLE AMIRVQCHKR NHPAAKLMTA LRELDLDVYH ASVSVVKDIM 540 IQQVAVKMAT RVYSQDQLNA ALYGRLAEPG TAMQIR

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

ELNSLIAGGG AAAPDEAVEE EVTDTEWFFL VSMTQSFPNG MGLPGQALFA GQPTWIATGL  60
ASAPCERARQ AYTFGLRTMV CIPLGTGVLE LGATEVIFQT NDSLGRIRSL FNLNGGGGGS  120
GSWPPIAPPP QEAETDPSVL WLADAPAGDM KESPPSVEIS VSKPPQPQPP QIHQFENGST  180
STLTENPGLS VHAQQPPPQQ AAASAQRQNQ HQLQHQHQLQ LQHQHNQGPF RRELNFSDFA  240
SNASVTVTPP FFKPESGEIL NFGADSTSRR NPSPAPPAAT ASLTTAPGSL FSQHTATVTA  300
PSNDAKNNPK RSMEATSRAS NTNHHQTATA NEGMLSFSSA PTTRPSTGTG APAKSESDHS  360
DLEASVREVE SSRVVPPPEE KRPRKRGRKP ANGREEPLNH VEAERQRREK LNQRFYALRA  420
VVPNVSKMDK ASLLGDAISY INELRGKMTA LESDKETLHS QIEALKKERD ARPAAPSSGM  480
HDNGARCHAV EIEAKILGLE AMIRVQCHKR NHPAAKLMTA LRELDLDVYH ASVSVVKDIM  540
IQQVAVKMAT RVYSQDQLNA ALYGRLAEPG TAMQIR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	381	389	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-106	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG029280.2