PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG031580.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 407aa    MW: 43040.7 Da    PI: 6.9486
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG031580.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS267.25.6e-82413852360
              GRAS   2 velLlecAeavssgdlelaqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                       v++L e+A++ ++gd+  a+++Larl+ +   a  +g+p+ R a+yf+eAL+  l+       ++ +p ++++++++ +l a+k+fsevsP+l
  TRIDC1AG031580.2  41 VDQLAEAAKFAEAGDAFGAREILARLNYRlpaAPAAGTPLLRSAFYFKEALRLALSP----NGETPAPPASTPYDVVLKLGAYKAFSEVSPVL 129
                       689*************************999455566*******************9....45566777778899****************** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       +f+hlt+ qa+l+ + g+ ++H++Dfdi++G QW++L+q+La+R +++  l++T+++sp+s++  el+ ++e+L++fA+elgv f+f+v+   
  TRIDC1AG031580.2 130 QFAHLTCVQAVLDGLRGAGCIHVLDFDIGMGEQWASLMQELAQR-RPATALKVTALVSPASHHPLELQLIHENLSSFAAELGVFFQFTVF--- 218
                       *******************************************9.7889****************************************9... PP

              GRAS 185 rledleleeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       ++++l++ +L     g+alaV+l +   +          + ++vL+lvksl +kvvv v++ +d+++ +F++++++a++  + l++s++a  +
  TRIDC1AG031580.2 219 NIDTLDPADLVAIAgGDALAVHLPVGAAHAA--------AMPAVLRLVKSLGAKVVVSVDRGCDRTELPFAAHLFQAFQSTVFLLESVDAV-G 302
                       999999999955555**********999997........4566*********************************************988.7 PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvl 360
                       ++ +++ k+Er+l++++++++v  ++++    ++    Wr+ + +aGF+pv+ s++a++qa++ll+kv+++g+rve++  gsl+l
  TRIDC1AG031580.2 303 TDPDTAGKIERFLVQPAVEQCVVGRHRA--SIEKAPLPWRAVFASAGFTPVQASTFAESQAESLLHKVPVRGFRVEKRaPGSLCL 385
                       888*******************987777..55556699**************************************985344443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    
MAGAPAPKLP AFQGHLAPAG GFFPALKPKA GTANDEAAAT VDQLAEAAKF AEAGDAFGAR  60
EILARLNYRL PAAPAAGTPL LRSAFYFKEA LRLALSPNGE TPAPPASTPY DVVLKLGAYK  120
AFSEVSPVLQ FAHLTCVQAV LDGLRGAGCI HVLDFDIGMG EQWASLMQEL AQRRPATALK  180
VTALVSPASH HPLELQLIHE NLSSFAAELG VFFQFTVFNI DTLDPADLVA IAGGDALAVH  240
LPVGAAHAAA MPAVLRLVKS LGAKVVVSVD RGCDRTELPF AAHLFQAFQS TVFLLESVDA  300
VGTDPDTAGK IERFLVQPAV EQCVVGRHRA SIEKAPLPWR AVFASAGFTP VQASTFAESQ  360
AESLLHKVPV RGFRVEKRAP GSLCLYCVLN WKYSYVNGVA LHLPLVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.12e-75GRAS family protein