PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG032640.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 215aa    MW: 23548.8 Da    PI: 10.6034
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG032640.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.42.1e-096454586
          trihelix 45 rspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                      +s +qC++k+e+l+kry+++++++ +r+++   ++p+f  l+
  TRIDC1AG032640.1  6 KSGVQCRHKIEKLRKRYRAERTRSMGRSKG--PKWPFFPLLH 45
                      799**********************98443..47****9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
PTATYKSGVQ CRHKIEKLRK RYRAERTRSM GRSKGPKWPF FPLLHDLAGG GVPDASPNPI  60
IKIKPRGNAT PASPSPVSSP SSEDAGRSRS LHGLISNGGG GSGLRFTIPK ASRTKPGVPR  120
EARPDRDRGD DDPEAEAMAE VASALRAVGE GFLRMEERRL ELSLQMEKER MESEMKRTQA  180
LLDAQQVFVE AFLGKQQPHH KKAKLVSSAA AMEED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.13e-09Trihelix family protein