PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG033460.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 358aa    MW: 37523.8 Da    PI: 7.3327
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG033460.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.67e-18255289135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++C + kTp+WR gp g+ktLCnaCG+++++ +l
  TRIDC1AG033460.2 255 CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRL 289
                       *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MASEWEMAMG VELGMGMGSY HNASNVHAVP MGHQAGGYSA AAHHFYGMQP MRDASMRVDE  60
LLDFPTAGAH DFFPAAPDNG LHHHHHLGAG VGELSATTPS ATSSDHQTSM LSFADEFYIP  120
SEEAAELEWL SKFVDDSYSD MPNYSSAAHA AMAAANAANN GGGSSAGQDS CVTAVPGRGA  180
RSKRSRASAA AAAAWHSLMP HPPSQPSPSS SCSSSDFPSS TTARPSGSNC GSRGKKQGPV  240
AGGEVGLVEG GVRRCTHCAS EKTPQWRTGP LGPKTLCNAC GVRFKSGRLV PEYRPAASPT  300
FLLTQHSNSH RKVMELRRQK ELVLIRGSHR LDAAAAAAGP GPGVTVKPEL MFHDYGIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.14e-44GATA family protein