PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG033460.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 295aa    MW: 31475.7 Da    PI: 11.4992
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG033460.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA565.3e-18192226135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++C + kTp+WR gp g+ktLCnaCG+++++ +l
  TRIDC1AG033460.3 192 CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRL 226
                       *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
RPRLLPRRAG QRTPPPSPPR RRRGRAVGHH PFRHVVGSPD VHALLRRRVL HTRKHRIIDE  60
PAELEWLSKF VDDSYSDMPN YSSAAHAAMA AANAANNGGG SSAGQDSCVT AVPGRGARSK  120
RSRASAAAAA AWHSLMPHPP SQPSPSSSCS SSDFPSSTTA RPSGSNCGSR GKKQGPVAGG  180
EVGLVEGGVR RCTHCASEKT PQWRTGPLGP KTLCNACGVR FKSGRLVPEY RPAASPTFLL  240
TQHSNSHRKV MELRRQKELV LIRGSHRLDA AAAAAGPGPG VTVKPELMFH DYGIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.12e-43GATA family protein