PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG033740.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 232aa MW: 24166.9 Da PI: 8.2577

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG033740.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	65.8	8.1e-21	19	64	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEdell dav+++G ++W+ I+++++ gRt+k+c++rw + TRIDC1AG033740.1 19 KGSWSPEEDELLRDAVARHGARNWTVISAEIP-GRTGKSCRLRWCNQ 64 799***************************.*********985 PP
2	Myb_DNA-binding	57.1	4.1e-18	71	115	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T++Ed l+ d++ ++G++ W+tIar++ gRt++++k++w++ TRIDC1AG033740.1 71 RRAFTPDEDRLIFDLHSKHGNK-WATIARKLV-GRTDNSVKNHWNST 115 678*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MPDGGGGSDG AGAGAGRIKG SWSPEEDELL RDAVARHGAR NWTVISAEIP GRTGKSCRLR 60 WCNQLSPGVH RRAFTPDEDR LIFDLHSKHG NKWATIARKL VGRTDNSVKN HWNSTLRKRR 120 RAAAAAATAG NAAGGPAFAP ASAMSFQSVD LTKGGEDDYD DDDGDSDGSV EPPASAKRPR 180 VDVVPPAVKV DDRAPPPDPP TSLSLSLPGT GVGAVIPPTP PAPVPAPAPA KE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	117	121	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	4e-47	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG033740.1