PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG034800.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 180aa    MW: 18775.2 Da    PI: 8.459
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG034800.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.9e-204896355
               AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      y+G+r+++ +grW+AeIrdp++    +r++lg++ taeeAa+a++ a++ ++g
  TRIDC1AG034800.4 48 YRGIRRRP-WGRWAAEIRDPTK---GARVWLGTYATAEEAARAYDVAARDIRG 96
                      9*******.**********965...4**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MCGGAVIADF VPAGARRPDG SSADVPGSIL AGGEVKEKPL APGRKTAYRG IRRRPWGRWA  60
AEIRDPTKGA RVWLGTYATA EEAARAYDVA ARDIRGPKAK LNFPPAVGAP QAAAAVEGPG  120
APKKRRWVAA EESSASSSPL PVTAAGGTES LRERMSGLEA FLGLEDDDVE AWGAVDLILD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.15e-22ERF family protein