PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG036390.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SRS
Protein Properties Length: 225aa    MW: 23817.2 Da    PI: 8.5849
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG036390.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702209.21e-64181714154
            DUF702   4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrel..kskkqsalsstklssa 94 
                       g+++C dCGnqakkdC h+RCRtCCksrgfdC+thv+stW+paa+rre++     +s  aa   a+aa+k++r +  ++++++++s+t++s++
  TRIDC1AG036390.2  18 GSTTCSDCGNQAKKDCPHQRCRTCCKSRGFDCTTHVRSTWIPAARRREKHPLGGDLSPPAAP--ATAATKKPRFHssQTTTTTTTSRTSTSNG 108
                       7789********************************************98777777666655..44555555555115555556666666666 PP

            DUF702  95 eskkeletss.....lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                       +s+++ +        lP++v+++avfrcvrv+svddg +e+aYq+avsi+Gh+f+G+LydqG+++
  TRIDC1AG036390.2 109 TSSSQQD--ApfrdsLPRHVRAPAVFRCVRVTSVDDGADEFAYQAAVSINGHMFRGFLYDQGADN 171
                       6555444..233556***********************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
KQVASAVDYG GVSSGSGGST TCSDCGNQAK KDCPHQRCRT CCKSRGFDCT THVRSTWIPA  60
ARRREKHPLG GDLSPPAAPA TAATKKPRFH SSQTTTTTTT SRTSTSNGTS SSQQDAPFRD  120
SLPRHVRAPA VFRCVRVTSV DDGADEFAYQ AAVSINGHMF RGFLYDQGAD NGRTSNDEPS  180
HAHEAAVRSI SDLHLGNASA VPPDMYNTVS GAFILGGMGY GNTMN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19790.12e-40SRS family protein