PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG036810.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 247aa    MW: 26199.4 Da    PI: 6.7175
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG036810.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.8e-1964114155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       + ++GVr++  +g+WvAeIr+p   + r +r +lg+f ta +Aa+a++aa+++l+g
  TRIDC1AG036810.2  64 CPFRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFATALDAARAYDAAARALYG 114
                       679****999.**********8...3.35***********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
LFHFTCINIR LPVPDIPTHS SSIYLISSME QEVVAGMKQK KCCPLRRSRK GCMKGKGGPD  60
NQQCPFRGVR QRTWGKWVAE IREPNRGARL WLGTFATALD AARAYDAAAR ALYGDCARLN  120
LSASPSQMQQ HPPAQGSGGA NGNSAPGTPC CSSNNSNSSA STPTGTPTDM DCSAWMQPSY  180
CYSTAEAPED FEAYVTRLPK AEDFGLEGFQ EVPLEVLAEA GGGVSIWDLS IAPDMAAAAA  240
SSAAASA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.11e-29ERF family protein