PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG038620.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 312aa    MW: 31912.4 Da    PI: 7.126
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG038620.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.61.8e-3094147155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  TRIDC1AG038620.2  94 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 147
                       59*******************.********************************8 PP
2Myb_DNA-binding48.12.7e-1596146148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
  TRIDC1AG038620.2  96 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 146
                       789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MREEEEPSWF ARFDEDLPAP DELMPLSQSL ITRDLAAAFD IPTTHGGGGP LSGGADGAGG  60
AGGQEMNGGA SSAAGSSGGN GGGNGEEPAR TLKRPRLVWT PQLHKRFVDA VAHLGIKNAV  120
PKTIMQLMSV DGLTRENVAS HLQKYRLYLK RMQGLGNGGG GGGGSHSSGS GTDAATEHLF  180
ATGPSPFLPP GRGPAVADPY TPYAAMPSHP AAHHHHHHPQ QIGHFHHPAA RPFGHYGAGP  240
GGGFDHGFLS RAVASGAPVG PPGMHHRMVG GGAAMGMMAP SSFAEELELG SRGGGGGGGR  300
RELTLFPTSG EH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1292300RGGGGGGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.11e-49G2-like family protein