PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG038860.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 186aa    MW: 20584.4 Da    PI: 11.483
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG038860.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260141.52.8e-4436134199
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +CaaCk+lrrkC++dCv+apyfp ++p+kf  vh++FGasnv+kll++l++ +reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+++
  TRIDC1AG038860.4  36 PCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELNPYQREDAVNSLAYEADMRLRDPVYGCVGVISVLQHQLRQLQQD 128
                       7******************************************************************************************** PP

            DUF260  94 lallke 99 
                       l++++ 
  TRIDC1AG038860.4 129 LSRARY 134
                       *99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MASSSASSFP GSVITMASSA AAVGAASSGA AGTGSPCAAC KFLRRKCQPD CVFAPYFPPD  60
NPQKFVHVHR VFGASNVTKL LNELNPYQRE DAVNSLAYEA DMRLRDPVYG CVGVISVLQH  120
QLRQLQQDLS RARYELSKYQ SRRLRRWRSR RLWGATGRRQ WRISSATRCP TARRTSSTSA  180
TPRRSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65620.36e-52LBD family protein