PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG039240.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 251aa MW: 27661.3 Da PI: 9.9036

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG039240.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	91.4	4.3e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtf+kRrng+lKKA+ELSvLC+ae+a+i+fs +g+lyey+s TRIDC1AG039240.2 9 KRIENTTSRQVTFCKRRNGLLKKAYELSVLCEAEIALIVFSARGRLYEYAS 59 79***********************************************86 PP
2	K-box	105.6	6.1e-35	83	173	9	99
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + + +++ qqe+akL+ +i++Lq+ +R+l+Ge++++L+lkeL++Le++L+k++ +iR+kK+ell+++ie++qk e +lq+en++Lr+k++ TRIDC1AG039240.2 83 IDVNSQQYFQQESAKLRHQIQSLQNANRNLMGESVGNLTLKELKSLENRLDKGIGRIRAKKHELLFAEIEYMQKLEADLQSENMYLRAKVA 173 5667789**********************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MGRGKIEIKR IENTTSRQVT FCKRRNGLLK KAYELSVLCE AEIALIVFSA RGRLYEYASN 60 STRTTIDRYK KASASASGSA PAIDVNSQQY FQQESAKLRH QIQSLQNANR NLMGESVGNL 120 TLKELKSLEN RLDKGIGRIR AKKHELLFAE IEYMQKLEAD LQSENMYLRA KVADAERLAL 180 AAPPPSSGGA ELEVLPTFDA RTYYHHQAVS MLQDAAAASS SSRYSQSSQA AAAAATTALH 240 LGYQIKGGQL N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09960.1	4e-84	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG039240.2