PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG039320.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 192aa    MW: 19906.4 Da    PI: 9.2341
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG039320.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.13.3e-162877255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       ykGVr++  +g+Wv+eIr+p +   r r +lg++ tae Aa a++aa   l+g
  TRIDC1AG039320.1 28 PYKGVRRRQ-WGKWVSEIRVPGT---RERLWLGSYATAEAAAVAHDAAVCLLRG 77
                      59****887.**********943...5*********************988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
TRTLRPAIVM DQRAACGGEG GGGLRRRPYK GVRRRQWGKW VSEIRVPGTR ERLWLGSYAT  60
AEAAAVAHDA AVCLLRGGAG GLNFPGRAAA YGRVLHHGGA GQQLSPRSVQ RVASDAGMAA  120
DAQLVELRER VPAPPGQETA PDGGIGAVHG GAGAGEQVAY GGTRSCSPGG EQLVYGELSV  180
DDIEIVTMLQ SL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.12e-22ERF family protein