PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG039320.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 141aa    MW: 14762.7 Da    PI: 10.5175
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG039320.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2521.8e-162271255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       ykGVr++  +g+Wv+eIr+p +   r r +lg++ tae Aa a++aa   l+g
  TRIDC1AG039320.2 22 PYKGVRRRQ-WGKWVSEIRVPGT---RERLWLGSYATAEAAAVAHDAAVCLLRG 71
                      59****887.**********943...5*********************988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
AIVMDQRAAC GGEGGGGLRR RPYKGVRRRQ WGKWVSEIRV PGTRERLWLG SYATAEAAAV  60
AHDAAVCLLR GGAGGLNFPG RAAAYGRVLH HGGAGQQLSP RSVQRVASDA GMAADAQLVE  120
LRERVPAPPG QETAPDGGID Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.16e-23ERF family protein