PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG039400.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 172aa    MW: 19192.1 Da    PI: 10.2936
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG039400.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.53.9e-51191431128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                        lppGfrFhPtdeelv++yL+++++g ++++  +i+evd+yk++Pw+Lp+++  +ekewyfFs+rd+ky++g+r+nr++ +gyWkatg dk+v
  TRIDC1AG039400.10  19 LPPGFRFHPTDEELVMHYLCRRCAGLPISV-PIIAEVDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPV 109
                        79****************************.88***************7666789************************************* PP

                NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +   +   +kk Lvfy g+apkg kt+W+mheyrl
  TRIDC1AG039400.10 110 GT--PKPLAIKKALVFYAGKAPKGDKTNWIMHEYRL 143
                        99..7789**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MSGGGGGAAA TQGQQDLQLP PGFRFHPTDE ELVMHYLCRR CAGLPISVPI IAEVDLYKFD  60
PWQLPRMALY GEKEWYFFSP RDRKYPNGSR PNRSAGTGYW KATGADKPVG TPKPLAIKKA  120
LVFYAGKAPK GDKTNWIMHE YRLADVDRSA RKKNSLRVRP ILPSDLRTIS GA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.12e-92NAC family protein