PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG039400.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 182aa    MW: 20758.9 Da    PI: 10.5407
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG039400.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.24.6e-5191331128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdeelv++yL+++++g ++++  +i+evd+yk++Pw+Lp+++  +ekewyfFs+rd+ky++g+r+nr++ +gyWkatg dk+v 
  TRIDC1AG039400.8   9 LPPGFRFHPTDEELVMHYLCRRCAGLPISV-PIIAEVDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPVG 100
                       79****************************.88***************7666789*************************************9 PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +   +   +kk Lvfy g+apkg kt+W+mheyrl
  TRIDC1AG039400.8 101 T--PKPLAIKKALVFYAGKAPKGDKTNWIMHEYRL 133
                       9..7789**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
TQGQQDLQLP PGFRFHPTDE ELVMHYLCRR CAGLPISVPI IAEVDLYKFD PWQLPRMALY  60
GEKEWYFFSP RDRKYPNGSR PNRSAGTGYW KATGADKPVG TPKPLAIKKA LVFYAGKAPK  120
GDKTNWIMHE YRLADVDRSA RKKNSLRVRP ILPSDLRTVG GPNCIRSRLS SRIDRTWKIS  180
GA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.12e-92NAC family protein