PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG039400.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 177aa    MW: 20302.4 Da    PI: 10.6265
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG039400.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.44.2e-51101341128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdeelv++yL+++++g ++++  +i+evd+yk++Pw+Lp+++  +ekewyfFs+rd+ky++g+r+nr++ +gyWkatg dk+v 
  TRIDC1AG039400.9  10 LPPGFRFHPTDEELVMHYLCRRCAGLPISV-PIIAEVDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPVG 101
                       79****************************.88***************7666789*************************************9 PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +   +   +kk Lvfy g+apkg kt+W+mheyrl
  TRIDC1AG039400.9 102 T--PKPLAIKKALVFYAGKAPKGDKTNWIMHEYRL 134
                       9..7789**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
ATQGQQDLQL PPGFRFHPTD EELVMHYLCR RCAGLPISVP IIAEVDLYKF DPWQLPRMAL  60
YGEKEWYFFS PRDRKYPNGS RPNRSAGTGY WKATGADKPV GTPKPLAIKK ALVFYAGKAP  120
KGDKTNWIMH EYRLADVDRS ARKKNSLRVR PILPSDLRTI RSRLSSRIDR TWKISGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.13e-92NAC family protein