PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG039490.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 192aa MW: 22387 Da PI: 10.0173

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG039490.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	82.2	3.4e-26	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien+snrqvtf+kRr+g+ KKA E+ vLCdaev v+ifss gkly++ TRIDC1AG039490.1 9 KRIENSSNRQVTFAKRRAGLVKKAREIGVLCDAEVGVVIFSSAGKLYDFW 58 79*********************************************995 PP
2	K-box	66	1.4e-22	71	158	1	88
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelq 88 yq++sgk l+++k++s + e++++kke++n+q e+Rh++Ged++sL+ keL +e++L ++ ++ R+k +++++++ ++ ++ e+e++ TRIDC1AG039490.1 71 YQTNSGKILWDEKHKSISAEIDRVKKENDNMQIELRHMKGEDVNSLQPKELIAIEEALTNGQTNLRDKMMDHWKMHRRNEKMLEEEHK 158 89999999************************************************************88888888888888777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MGRGKIEIKR IENSSNRQVT FAKRRAGLVK KAREIGVLCD AEVGVVIFSS AGKLYDFWTP 60 KTTLPRILEK YQTNSGKILW DEKHKSISAE IDRVKKENDN MQIELRHMKG EDVNSLQPKE 120 LIAIEEALTN GQTNLRDKMM DHWKMHRRNE KMLEEEHKLL ALRMVILEYF LAFFSLELIT 180 LRNCRHASSF AN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20240.1	4e-64	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG039490.1