PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG039490.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 185aa    MW: 21607.1 Da    PI: 10.6648
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG039490.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF82.23.2e-26958150
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                      krien+snrqvtf+kRr+g+ KKA E+ vLCdaev v+ifss gkly++ 
  TRIDC1AG039490.4  9 KRIENSSNRQVTFAKRRAGLVKKAREIGVLCDAEVGVVIFSSAGKLYDFW 58
                      79*********************************************995 PP
2K-box652.8e-2271148178
             K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqie 78 
                       yq++sgk l+++k++s + e++++kke++n+q e+Rh++Ged++sL+ keL  +e++L ++ ++ R+k +++++++ +
  TRIDC1AG039490.4  71 YQTNSGKILWDEKHKSISAEIDRVKKENDNMQIELRHMKGEDVNSLQPKELIAIEEALTNGQTNLRDKMMDHWKMHRR 148
                       89999999************************************************************9999988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MGRGKIEIKR IENSSNRQVT FAKRRAGLVK KAREIGVLCD AEVGVVIFSS AGKLYDFWTP  60
KTTLPRILEK YQTNSGKILW DEKHKSISAE IDRVKKENDN MQIELRHMKG EDVNSLQPKE  120
LIAIEEALTN GQTNLRDKMM DHWKMHRRNV WALNLPLLFA FPSVHHGSFL KKNLQRSAFY  180
WQRKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.16e-60MIKC_MADS family protein