PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG039770.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 400aa MW: 44380.6 Da PI: 4.2769

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG039770.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.7	1.2e-49	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhPtd elv++yLk+k+ gkkl + e+i+ev++yk+ PwdLp k ++++++ ew+fF++rdkky++g+r+nrat +gyWk++gkd++ TRIDC1AG039770.1 6 LPPGFRFHPTDVELVSYYLKRKIMGKKLFV-EAISEVELYKFAPWDLPdKsCLQSKDLEWFFFCPRDKKYPKGSRTNRATPNGYWKTSGKDRT 97 79***********************999.89**********96347777888******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ vglkktL+f++g+apkg++tdWvm ey++ TRIDC1AG039770.1 98 IEL-NSRIVGLKKTLIFHEGKAPKGNRTDWVMYEYKM 133 .999***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MAQTCLPPGF RFHPTDVELV SYYLKRKIMG KKLFVEAISE VELYKFAPWD LPDKSCLQSK 60 DLEWFFFCPR DKKYPKGSRT NRATPNGYWK TSGKDRTIEL NSRIVGLKKT LIFHEGKAPK 120 GNRTDWVMYE YKMEDETLVS AGFSKDAYVL CKIFKKSGLG PRIGEQYGAP FDENEWENLD 180 VGSSIFSFAP SSGVEDPQVN DAPPEIDGIL LDELTKFLND SPNHDVRSPE NSGLPPMSEL 240 EAQAFEINTA ELCDQLAVLA QSGDMPAANF PASNGDVIEN NLQQTNSGLA MDDDYIGLDD 300 LFAPGETFSY DFSGETFSYD LPGGTFSYLS VPNNQFSQYP LDQSSNGLHY GDGATQSTFL 360 ASGPLPPLEP MPSTFDDMPS VSNKPASSYC LNPAMKDPFS

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MAQTCLPPGF RFHPTDVELV SYYLKRKIMG KKLFVEAISE VELYKFAPWD LPDKSCLQSK  60
DLEWFFFCPR DKKYPKGSRT NRATPNGYWK TSGKDRTIEL NSRIVGLKKT LIFHEGKAPK  120
GNRTDWVMYE YKMEDETLVS AGFSKDAYVL CKIFKKSGLG PRIGEQYGAP FDENEWENLD  180
VGSSIFSFAP SSGVEDPQVN DAPPEIDGIL LDELTKFLND SPNHDVRSPE NSGLPPMSEL  240
EAQAFEINTA ELCDQLAVLA QSGDMPAANF PASNGDVIEN NLQQTNSGLA MDDDYIGLDD  300
LFAPGETFSY DFSGETFSYD LPGGTFSYLS VPNNQFSQYP LDQSSNGLHY GDGATQSTFL  360
ASGPLPPLEP MPSTFDDMPS VSNKPASSYC LNPAMKDPFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	1e-83	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG039770.1