PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG041460.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 237aa MW: 25726.7 Da PI: 8.1264

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG041460.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.6	1.7e-14	85	129	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + k++G g+W+ I+r + Rt+ q+ s+ qky TRIDC1AG041460.2 85 PWTEEEHKLFLMGLKKYGRGDWRNISRNYVTSRTPTQVASHAQKY 129 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
VAALLPGKTV ADVMRQYDDL ENDVCFIEAG LVPFPHYNAN APASGFTLDW DGGGDLAFKR 60 SCYMAAGGNG KRGRGADQER KKGVPWTEEE HKLFLMGLKK YGRGDWRNIS RNYVTSRTPT 120 QVASHAQKYF IRLNSGGKDK RRSSIHDITT VNIPDDDHAS NTNPSPSPPS ALTATSSAPE 180 QFGALADSKP PPPLGGHHHF MPAHLYGSVK LEASNNGYHG DSALMQMHQC GQLQPLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	6e-66	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG041460.2