PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG041580.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LSD
Protein Properties Length: 35aa    MW: 3671.23 Da    PI: 8.7668
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG041580.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD1314.2e-10220725
            zf-LSD1  7 lLsYPrGApsVRCalCdtV 25
                       lL+Y +GA+sV+Ca+C +V
  TRIDC1AG041580.11  2 LLMYQYGARSVKCAVCSFV 20
                       8***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 35 aa     Download sequence    
MLLMYQYGAR SVKCAVCSFV TSVGASSGAE QKPSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32540.13e-12LSD family protein