PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG041580.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LSD
Protein Properties Length: 66aa    MW: 6689.82 Da    PI: 7.925
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG041580.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD146.17.8e-152044125
           zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdtV 25
                      C+gCr+lL+YP+GA+sV+Ca+C tV
  TRIDC1AG041580.6 20 CSGCRNLLMYPAGATSVCCAVCSTV 44
                      ***********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 66 aa     Download sequence    
SCALHTTRSQ CRGAQSQLVC SGCRNLLMYP AGATSVCCAV CSTVTAVPAP GTEMAQLVCG  60
GCHTLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32540.34e-16LSD family protein