PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG041920.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 237aa    MW: 25774.1 Da    PI: 7.5716
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG041920.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.5e-1071118454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++  rE+ RRdr+N++f+eL  +l +    + +K +K++iL  A++ + +L
  TRIDC1AG041920.3  71 TKACREKLRRDRLNERFNELCAVLEPG---KPPKADKVAILSDATRLLDQL 118
                       6789**********************9...99**************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
GVGQGGWLLD YGLVEEEIQA SDFIYMVDDP PVSSVILGFD APRREDAAAA AQDNSGAKKR  60
SRPESSAQPG TKACREKLRR DRLNERFNEL CAVLEPGKPP KADKVAILSD ATRLLDQLRA  120
EAQKLKVSNE SLQDSIKSLK SEKSELRDEK TQLKAERERL EQMLKGVSAA AAAPRQFVPH  180
PAAAAAPQFH PAAAYAHAGK FVPAYAAGYP PPAAFWQWIP PTSLDTSKDP AHWPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-43bHLH family protein