PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG043130.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 122aa    MW: 12993.7 Da    PI: 5.241
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG043130.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB183.41.8e-5722116195
              NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 
                        vreqdrflPian+srimkk++Pan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfe+y+eplkvyl+kyre
  TRIDC1AG043130.11  22 VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEEYIEPLKVYLQKYRE 113
                        69****************************************************************************************** PP

              NF-YB  93 leg 95 
                        + g
  TRIDC1AG043130.11 114 VTG 116
                        975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
GGGGGGGGGS DDGGGGGGFG GVREQDRFLP IANISRIMKK AIPANGKIAK DAKETVQECV  60
SEFISFITSE ASDKCQREKR KTINGDDLLW AMATLGFEEY IEPLKVYLQK YREVTGVALS  120
FQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.14e-63NF-YB family protein